Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015908539.1_cds_XP_016458655.1_52260
CDS Infomation

[gene=LOC107782300] [db_xref=GeneID:107782300] [protein=protein disulfide isomerase-like 1-6] [protein_id=XP_016458655.1] [location=complement(join(27984..28079,28166..28219,29305..29439,29656..29736,31160..31228,31314..31385,31477..31566,31651..31731,32541..32659,32955..33120,33666..33795,34247..34746))] [gbkey=CDS]
Sequence

ATGTATAATCCAAAACCCACTTCAAAATTTATCCTTTTCTCTTTAGTCCTCCTCCTCTTG
CTCAGCTTCTTGGCTCTGTCTATATGTTCCGAATTAGATTTATCTGATGACGATGGTGAT
GACGTGGAAGCTTTAGAAGAACTCATAGCATTGGACGAAAAAGAAGATTCACATCAGCAA
AATGCTGAATCTGAGTTTGTAAGTAAAGCCCAAAGAATAGTACTTGAACTTAACAATGAC
AATACTAAAAGGGCAATTGATGGAAATGAATACGTACTGGTTTTGGGTTACGCGCCGTGG
TGCGTTAGGAGTGCTGAGCTAATGCCGAAATTTGCTGAGGCTGCTACTGCTCTTAAGGAA
TTGGGAAGTCATCTTTTAATGGCTAAGATTGATGCTGAACGTTACCCTAAGGTTGCTTCA
ACTCTTGATATCAAAGGGTTCCCCACTCTGCTTCTGTTTGTTAACGGCACTTCTCAACCT
TATACTGGTGGATTCTCTGCGGAAGAACTTGTTATCTGGGCAAGGAAAAAGACAGGGGTA
CCTGTTATTAGAATTAACTCGGATGCTGAGGCGATCCACTTTCTCAAGAAGTATTCCATG
TTTGTGGTTGGTCTTTTTGATAAATTTGAGGGACCTGATTATGATGAATTTACAAAAGCA
GCCAAAATGGACAATGAAATCCAGTTTGTGGAAACTAGCAATGCAGAGATTGCCAAGCAC
CTCTTCCACAATTTTAAGGCAACCAATCTTTTCCTTGGCCTTGTTAAACGTGAGCCAGAG
AAATACACTGAATATGAAGGAACCTTCAGTACAGAAAGAATCTTGCAGTTTTTGGATGAT
AATAAGTTCCCCTTAATTACAGTACTTACTGAACTTAATGCTGCTAGAGTTTACTCCAGC
TCAAATAAACTTCAGGTATTAATCATTTCTGAGCCTGATAACTTCAAGAAACTTGTAGAA
CCTTTGCAAGACGTTGCAATAAAGTTCAAACCACAGATAATGTTCATATTTGTAGATGTT
AGGGAGGACAATCTTGCAAAACCCTTCCTTACTATGTTTGGTCTTGAAGAATCAAAAGAC
TCTGTTGTAATATCTTTCAACTACCGTAGCAACTTGAAGTATTTGTTAGAGTCAGATGCC
ACACCAACAAGCATAGAAGATTTCTGTTCAGGTCTTCTGAGTGGGAGTGTGTCAGCATAC
TACAAATCACAACCAATTCCTGATAATAAGAACATGAGCATTCTGACAGTTGTTGGTAAG
ACCTTTGATAAATTGATCCTGAACAGCCCGGAAAACATTCTTCTAGAGGTATATACACCA
TGGTGCATAACTTGTGAAACCACAAGCAAGCAAATGGAGAAGTTGGCCAAGCATTTCAAA
GGTTTGGAGAACTTGATCTTTGCAAGGATAGATGCTTCCCTAAACGAACATCCAAGATTA
CAGGTTGATGACTATCCAACTCTCCTCTTCTACTCAGCAGATGACAAGACAAAGCCGATA
ACATTTCCTACAAAATCAAGCGCAAAAGATTTGGCTGCTCTCGTCAACCAGAATTTGAAA
GCACAAGATCCTGAAATCAGAGATGAACTATAG

Peptide Sequence

PEP ID

XP_016458655.1
PEP Infomation

PREDICTED: protein disulfide isomerase-like 1-6 [Nicotiana tabacum]
Sequence

MYNPKPTSKFILFSLVLLLLLSFLALSICSELDLSDDDGDDVEALEELIALDEKEDSHQQ
NAESEFVSKAQRIVLELNNDNTKRAIDGNEYVLVLGYAPWCVRSAELMPKFAEAATALKE
LGSHLLMAKIDAERYPKVASTLDIKGFPTLLLFVNGTSQPYTGGFSAEELVIWARKKTGV
PVIRINSDAEAIHFLKKYSMFVVGLFDKFEGPDYDEFTKAAKMDNEIQFVETSNAEIAKH
LFHNFKATNLFLGLVKREPEKYTEYEGTFSTERILQFLDDNKFPLITVLTELNAARVYSS
SNKLQVLIISEPDNFKKLVEPLQDVAIKFKPQIMFIFVDVREDNLAKPFLTMFGLEESKD
SVVISFNYRSNLKYLLESDATPTSIEDFCSGLLSGSVSAYYKSQPIPDNKNMSILTVVGK
TFDKLILNSPENILLEVYTPWCITCETTSKQMEKLAKHFKGLENLIFARIDASLNEHPRL
QVDDYPTLLFYSADDKTKPITFPTKSSAKDLAALVNQNLKAQDPEIRDEL

Transcript Sequence

Gene sequence data has not been registered.